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Author:

Guo, Wenyang (Guo, Wenyang.) | Du, Yongping (Du, Yongping.) (Scholars:杜永萍) | Zhao, Yiliang (Zhao, Yiliang.) | Ren, Keyan (Ren, Keyan.)

Indexed by:

Scopus SCIE

Abstract:

Biomedical machine reading comprehension aims to extract the answer to the given question from complex biomedical passages, which requires the machine to have the ability to process strong comprehension on natural language. Recent progress has made on this task, but still severely restricted by the insufficient training data due to the domain-specific nature. To solve this problem, we propose a hierarchical question-aware context learning model trained by the multi-task transfer learning algorithm, which can capture the interaction between the question and the passage layer by layer, with multi-level embeddings to strengthen the ability of the language representation. The multi-task transfer learning algorithm leverages the advantages of different machine reading comprehension tasks to improve model generalisation and robustness, pre-training on multiple large-scale open-domain data sets and fine-tuning on the target-domain training set. Moreover, data augmentation is also adopted to create new training samples with various expressions. The public biomedical data set collected from PubMed provided by BioASQ is used to evaluate the model performance. The results show that our method is superior to the best recent solution and achieves a new state of the art.

Keyword:

transfer learning attention data augmentation multi-task learning biomedical machine reading comprehension

Author Community:

  • [ 1 ] [Guo, Wenyang]Beijing Univ Technol, Fac Informat Technol, Beijing 100124, Peoples R China
  • [ 2 ] [Du, Yongping]Beijing Univ Technol, Fac Informat Technol, Beijing 100124, Peoples R China
  • [ 3 ] [Zhao, Yiliang]Beijing Univ Technol, Fac Informat Technol, Beijing 100124, Peoples R China
  • [ 4 ] [Ren, Keyan]Beijing Univ Technol, Fac Informat Technol, Beijing 100124, Peoples R China

Reprint Author's Address:

  • [Ren, Keyan]Beijing Univ Technol, Fac Informat Technol, Beijing 100124, Peoples R China

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Source :

INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS

ISSN: 1748-5673

Year: 2020

Issue: 3

Volume: 23

Page: 234-250

0 . 3 0 0

JCR@2022

ESI Discipline: COMPUTER SCIENCE;

ESI HC Threshold:132

Cited Count:

WoS CC Cited Count: 0

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 1

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