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Author:

Huang, Yuning (Huang, Yuning.) | Zou, Jingchen (Zou, Jingchen.) | Meng, Lanxi (Meng, Lanxi.) | Yue, Xin (Yue, Xin.) | Zhao, Qing (Zhao, Qing.) | Li, Jianqiang (Li, Jianqiang.) | Song, Changwei (Song, Changwei.) | Jimenez, Gabriel (Jimenez, Gabriel.) | Li, Shaowu (Li, Shaowu.) | Fu, Guanghui (Fu, Guanghui.)

Indexed by:

CPCI-S EI Scopus

Abstract:

Medical image analysis frequently encounters data scarcity challenges. Transfer learning has been effective in addressing this issue while conserving computational resources. The recent advent of foundational models like the DINOv2, which uses the vision transformer architecture, has opened new opportunities in the field and gathered significant interest. However, DINOv2's performance on clinical data still needs to be verified. In this paper, we performed a glioma grading task using three clinical modalities of brain MRI data. We compared the performance of various pre-trained deep learning models, including those based on ImageNet and DINOv2, in a transfer learning context. Our focus was on understanding the impact of the freezing mechanism on performance. We also validated our findings on three other types of public datasets: chest radiography, fundus radiography, and dermoscopy. Our findings indicate that in our clinical dataset, DINOv2's performance was not as strong as ImageNet-based pre-trained models, whereas in public datasets, DINOv2 generally outperformed other models, especially when using the frozen mechanism. Similar performance was observed with various sizes of DINOv2 models across different tasks. In summary, DINOv2 is viable for medical image classification tasks, particularly with data resembling natural images. However, its effectiveness may vary with data that significantly differs from natural images such as MRI. In addition, employing smaller versions of the model can be adequate for medical task, offering resource-saving benefits. Our codes are available at https://github.com/GuanghuiFU/medical_dino_eval.

Keyword:

Foundation model Pretrained Classification Brain MRI Transfer learning Glioma

Author Community:

  • [ 1 ] [Huang, Yuning]Beijing Univ Technol, Sch Software Engn, Beijing, Peoples R China
  • [ 2 ] [Zou, Jingchen]Beijing Univ Technol, Sch Software Engn, Beijing, Peoples R China
  • [ 3 ] [Yue, Xin]Beijing Univ Technol, Sch Software Engn, Beijing, Peoples R China
  • [ 4 ] [Zhao, Qing]Beijing Univ Technol, Sch Software Engn, Beijing, Peoples R China
  • [ 5 ] [Li, Jianqiang]Beijing Univ Technol, Sch Software Engn, Beijing, Peoples R China
  • [ 6 ] [Song, Changwei]Beijing Univ Technol, Sch Software Engn, Beijing, Peoples R China
  • [ 7 ] [Meng, Lanxi]Capital Med Univ, Beijing Tiantan Hosp, Beijing Neurosurg Inst, Dept Neuroimaging, Beijing, Peoples R China
  • [ 8 ] [Li, Shaowu]Capital Med Univ, Beijing Tiantan Hosp, Beijing Neurosurg Inst, Dept Neuroimaging, Beijing, Peoples R China
  • [ 9 ] [Jimenez, Gabriel]Sorbonne Univ, Hop Pitie Salpetriexe, AP HP, Inst Cerveau,Paris Brain Inst ICM,CNRS,INRIA,INSE, Paris, France
  • [ 10 ] [Fu, Guanghui]Sorbonne Univ, Hop Pitie Salpetriexe, AP HP, Inst Cerveau,Paris Brain Inst ICM,CNRS,INRIA,INSE, Paris, France

Reprint Author's Address:

  • [Fu, Guanghui]Sorbonne Univ, Hop Pitie Salpetriexe, AP HP, Inst Cerveau,Paris Brain Inst ICM,CNRS,INRIA,INSE, Paris, France

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Source :

2024 IEEE 48TH ANNUAL COMPUTERS, SOFTWARE, AND APPLICATIONS CONFERENCE, COMPSAC 2024

ISSN: 2836-3787

Year: 2024

Page: 297-305

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count: 1

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 2

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