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Author:

Sun, Xiao Hui (Sun, Xiao Hui.) | Guan, Jian Qing (Guan, Jian Qing.) | Tan, Jian Jun (Tan, Jian Jun.) | Liu, Chang (Liu, Chang.) | Wang, Cun Xin (Wang, Cun Xin.)

Indexed by:

EI Scopus

Abstract:

Integrase has become an attractive target for the design of anti-HIV inhibitor because it plays a quite important role in the process of HIV-1 virus replication. The quinoline ring derivatives, which have the similar pharmacophore to ..-diketoacids, are the kind of integrase inhibitor with highly antiviral activity. A series of quinoline ring derivatives were analyzed by the Comparative Molecular Field Analysis (CoMFA), comparative molecular similarity induces analysis (CoMSIA) and Topomer CoMFA methods. Firstly, we chose 77 compounds from former papers as a dataset, followed by dividing it into the training set and test set randomly. Then, we constructed predictive models of CoMFA, CoMSIA and Topomer CoMFA, respectively. The CoMFA yielded the best cross-validated model with a q2=0.758, non-cross-validated r 2=0.988. The CoMSIA model yielded a q2 =0.701 and r 2 =0.986 while the Topomer CoMFA model has q2 =0.661 and r2 = 0.966. Through verification, these results suggested a strong predictive ability to the design of novel highly active HIV-1 integrase inhibitors for therapy. © 2013 Springer-Verlag.

Keyword:

Medical Physics Computational chemistry Statistical tests Diseases Biomedical engineering

Author Community:

  • [ 1 ] [Sun, Xiao Hui]College of Life Science and Bio-engineering, Beijing University of Technology, No. 100 Pingleyuan street, Chaoyang District, Beijing 100124, China
  • [ 2 ] [Guan, Jian Qing]College of Life Science and Bio-engineering, Beijing University of Technology, No. 100 Pingleyuan street, Chaoyang District, Beijing 100124, China
  • [ 3 ] [Tan, Jian Jun]College of Life Science and Bio-engineering, Beijing University of Technology, No. 100 Pingleyuan street, Chaoyang District, Beijing 100124, China
  • [ 4 ] [Liu, Chang]College of Life Science and Bio-engineering, Beijing University of Technology, No. 100 Pingleyuan street, Chaoyang District, Beijing 100124, China
  • [ 5 ] [Wang, Cun Xin]College of Life Science and Bio-engineering, Beijing University of Technology, No. 100 Pingleyuan street, Chaoyang District, Beijing 100124, China

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Source :

ISSN: 1680-0737

Year: 2013

Volume: 39 IFMBE

Page: 1276-1279

Language: English

Cited Count:

WoS CC Cited Count: 0

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 3

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