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作者:

Wang Qin (Wang Qin.) | Li Xiaoqin (Li Xiaoqin.) | Ma Shuai (Ma Shuai.)

收录:

EI Scopus SCIE PKU CSCD

摘要:

Protein folding study is one of the main ways to investigate structural stability and mechanism of proteins. pi-pi Interaction has been focused much attention on its role in the stability of protein structure and functions. In this paper, two typical protein folds of alpha/beta protein were selected for the research, pi-pi interactions of 205 low similarity protein samples were statistically analyzed. The results showed that the distribution density of pi-pi interactions in (alpha/beta)(8)-barrel fold was higher than those of classical Rossmann fold and the difference was more significant in the critical local area, aromatic amino acids easily form pi-pi interactions in (alpha/beta)(8)-barrel, the three 7r-Ir interaction combinations corresponding to Trp appearing in (alpha/beta)(8)-barrel were significantly higher than classic Rossmann and (alpha/beta)(8)-barrel fold had greater ability to form complex 7r-network than classical Rossmann fold. In a word, pi-pi interactions in different folding types of alpha/beta protein exist specificity. pi-pi Interaction effects the stability of (alpha/beta)(8)-barrel stronger than the classical Rossmann.

关键词:

(alpha/beta)(8)-Barrel fold Non-classical interaction pi-Network pi-pi Interaction Rossmann fold

作者机构:

  • [ 1 ] [Wang Qin]Beijing Univ Technol, Sch Life Sci & Bioengn, Beijing 100124, Peoples R China
  • [ 2 ] [Li Xiaoqin]Beijing Univ Technol, Sch Life Sci & Bioengn, Beijing 100124, Peoples R China
  • [ 3 ] [Ma Shuai]Beijing Univ Technol, Sch Life Sci & Bioengn, Beijing 100124, Peoples R China

通讯作者信息:

  • [Li Xiaoqin]Beijing Univ Technol, Sch Life Sci & Bioengn, Beijing 100124, Peoples R China

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来源 :

CHEMICAL JOURNAL OF CHINESE UNIVERSITIES-CHINESE

ISSN: 0251-0790

年份: 2014

期: 12

卷: 35

页码: 2674-2679

1 . 0 0 0

JCR@2022

ESI学科: CHEMISTRY;

ESI高被引阀值:195

JCR分区:4

中科院分区:4

被引次数:

WoS核心集被引频次: 2

SCOPUS被引频次: 2

ESI高被引论文在榜: 0 展开所有

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