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摘要:
Protein folding study is one of the main ways to investigate structural stability and mechanism of proteins. pi-pi Interaction has been focused much attention on its role in the stability of protein structure and functions. In this paper, two typical protein folds of alpha/beta protein were selected for the research, pi-pi interactions of 205 low similarity protein samples were statistically analyzed. The results showed that the distribution density of pi-pi interactions in (alpha/beta)(8)-barrel fold was higher than those of classical Rossmann fold and the difference was more significant in the critical local area, aromatic amino acids easily form pi-pi interactions in (alpha/beta)(8)-barrel, the three 7r-Ir interaction combinations corresponding to Trp appearing in (alpha/beta)(8)-barrel were significantly higher than classic Rossmann and (alpha/beta)(8)-barrel fold had greater ability to form complex 7r-network than classical Rossmann fold. In a word, pi-pi interactions in different folding types of alpha/beta protein exist specificity. pi-pi Interaction effects the stability of (alpha/beta)(8)-barrel stronger than the classical Rossmann.
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来源 :
CHEMICAL JOURNAL OF CHINESE UNIVERSITIES-CHINESE
ISSN: 0251-0790
年份: 2014
期: 12
卷: 35
页码: 2674-2679
1 . 0 0 0
JCR@2022
ESI学科: CHEMISTRY;
ESI高被引阀值:195
JCR分区:4
中科院分区:4
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