• 综合
  • 标题
  • 关键词
  • 摘要
  • 学者
  • 期刊-刊名
  • 期刊-ISSN
  • 会议名称
搜索

作者:

Su, Yansen (Su, Yansen.) | Wang, Shudong (Wang, Shudong.) | Li, Eryan (Li, Eryan.) | Song, Tao (Song, Tao.) | Yu, Hui (Yu, Hui.) | Meng, Dazhi (Meng, Dazhi.)

收录:

Scopus SCIE

摘要:

External stimuli may activate the stress response in Arabidopsis thaliana. The molecules which play important roles in the stress response have been widely studied. However, the interactions, especially logic interactions, among these molecules, need to be studied. In this paper, logic networks are constructed based on gene expression profiles of Arabidopsis under the normal condition and four different stimuli conditions, respectively. It is found that the distribution of different types of 2-order logics in the gene logic network under the normal condition is different from the others. Furthermore, the logic networks of genes which play important roles are constructed and their dynamics are simulated. It is then observed that the number of attractors in the logic network for Arabidopsis under the normal condition is less than those under four external stimuli. It is also observed that the number of attractors with large attraction domain in the logic network for Arabidopsis under the normal condition is greater than those under four external stimuli. The results show that the distribution of different types of 2-order logics and the number of attractors clearly distinguish logic network under the normal condition from those under external stimuli conditions. Our studies will provide the theoretical basis for experimental studies on the stress response of Arabidopsis.

关键词:

network dynamics network structure high-order logic gene network Arabidopsis systems biology

作者机构:

  • [ 1 ] [Su, Yansen]Huazhong Univ Sci & Technol, Dept Control Sci & Engn, Wuhan 430074, Hunan, Peoples R China
  • [ 2 ] [Song, Tao]Huazhong Univ Sci & Technol, Dept Control Sci & Engn, Wuhan 430074, Hunan, Peoples R China
  • [ 3 ] [Yu, Hui]Huazhong Univ Sci & Technol, Dept Control Sci & Engn, Wuhan 430074, Hunan, Peoples R China
  • [ 4 ] [Wang, Shudong]Shandong Univ Sci & Technol, Inst Informat Sci & Engn, Qingdao 266510, Shandong, Peoples R China
  • [ 5 ] [Li, Eryan]Shandong Univ Sci & Technol, Inst Informat Sci & Engn, Qingdao 266510, Shandong, Peoples R China
  • [ 6 ] [Meng, Dazhi]Shandong Univ Sci & Technol, Inst Informat Sci & Engn, Qingdao 266510, Shandong, Peoples R China
  • [ 7 ] [Meng, Dazhi]Beijing Univ Technol, Coll Appl Sci, Beijing 100124, Peoples R China

通讯作者信息:

  • [Meng, Dazhi]Shandong Univ Sci & Technol, Inst Informat Sci & Engn, Qingdao 266510, Shandong, Peoples R China

电子邮件地址:

查看成果更多字段

相关关键词:

相关文章:

来源 :

CURRENT BIOINFORMATICS

ISSN: 1574-8936

年份: 2013

期: 2

卷: 8

页码: 244-252

4 . 0 0 0

JCR@2022

ESI学科: COMPUTER SCIENCE;

JCR分区:2

中科院分区:4

被引次数:

WoS核心集被引频次: 2

SCOPUS被引频次: 2

ESI高被引论文在榜: 0 展开所有

万方被引频次:

中文被引频次:

近30日浏览量: 2

归属院系:

在线人数/总访问数:139/3908899
地址:北京工业大学图书馆(北京市朝阳区平乐园100号 邮编:100124) 联系我们:010-67392185
版权所有:北京工业大学图书馆 站点建设与维护:北京爱琴海乐之技术有限公司