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Author:

Jiao Xiong (Jiao Xiong.) | Wang Baohan (Wang Baohan.) | Su Jiguo (Su Jiguo.) | Chen Weizu (Chen Weizu.) | Wang Cunxin (Wang Cunxin.)

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PubMed

Abstract:

An approach to protein design is proposed based on the relative entropy and a reduced amino acid alphabet. In this approach, the relative entropy is used as a minimization object function. The method has been tested on a real protein's off-lattice model successfully, and the results are similar to those obtained from other design studies. It can be applied as a uniform frame for both folding and inverse folding of protein. An iterative calculation method of the ensemble average of the contact strength is proposed at the same time.

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  • [ 1 ] [Jiao Xiong]College of Life Science and Bioengineering, Beijing University of Technology, Beijing 100022, China

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Source :

Physical review. E, Statistical, nonlinear, and soft matter physics

ISSN: 1539-3755

Year: 2006

Issue: 6 Pt 1

Volume: 73

Page: 061903

ESI Discipline: PHYSICS;

JCR Journal Grade:1

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 1

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