In　this　study,　a　new　concept　concerning　comprehensive　characteristics　of　water　resources　utilization　as　an　index　for　risk　modeling　within　the　water　allocation　management　model　is　proposed　to　explore　the　tolerance　of　unbalanced　allocation　problem　under　water-energy　nexus.　The　model　is　integrated　with　interval　two-stage　stochastic　programming　for　reflecting　system　uncertainties.　These　uncertainties　are　associated　with　the　industrial　production　feature　and　the　decision-making　process.　With　respect　to　water-energy　nexus,　energy　proposed　is　mainly　focused　on　the　consumption　intensity　of　water　purification　and　transportation　from　different　water　sources.　The　developed　model　is　applied　for　industrial　water　resources　allocation　management　in　Henan　province,　China.　Multiple　scenarios　related　to　disparate　energy　consumption　control　and　the　comprehensive　risk　levels　are　simulated　to　obtain　a　reasonable　trade-off　among　system　profit,　comprehensive　risk,　and　energy　consumption.　The　results　indicated　that　the　strict　comprehensive　risk　management　or　energy　consumption　control　measures　could　cause　damage　to　system　benefit　owing　to　decreasing　the　flexibility　of　industrial　water　resources　distributions,　and　the　preliminary　energy　consumption　or　the　comprehensive　risk　control　would　be　beneficial　to　moderate　the　conflict　between　industrial　sectors　and　water　resources,　and　accelerate　industrial　structure　transformation　in　the　future.　HIGHLIGHTS　A　comprehensive　risk-oriented　industrial　water　resources　management　model　is　proposed.　Uncertainties　are　reflected　as　stochastic　and　interval　information.　Energy-water　nexus　is　a　constraint　index　for　water　purification　and　transportation.　The　tolerance　of　unbalanced　allocation　problem　is　explored.　Trade-off　among　system　profit,　comprehensive　risk,　and　energy　consumption　is　analyzed.