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To investigate the effects of real-time control on the structure of nitrifying communities of the short-cut nitrogen removal in SBR pilot-scale plant with a working volume of 54 m, molecular techniques of Fish, PCR-DGGE and PCR-Cloning-Sequencing were used to analyze ammonia-oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB) with the performance of short-cut nitrogen removal. Fish results show that in short-cut nitrogen removal process, AOB became dominant with compared to NOB and accounted for 3%-12% of the total biomass. More importantly, no NOB was detected. PCR-DGGE gel results show that AOB were phylogenetically related to Nitrosomonas-like species with a melting point at the range between 30% to 50%. PCR-Cloning-Sequencing results show that all clones were affiliated with Nitrosomonas corresponding to DGGE results and 60% of the clones were affiliated with Nitrosomonas europaea.
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