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作者:

Li, Ying-Xin (Li, Ying-Xin.) | Ruan, Xiao-Gang (Ruan, Xiao-Gang.)

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摘要:

The classification of different cancer subtypes and feature subset selection is of great importance in cancer diagnosis and has recently received a great deal of attention in the field of bioinformatics. The purpose of this study is to develop a method of classifying tumors to specific categories and select a small subset of genes for classification based on gene expression profiles. Firstly, a new metric for class separability was proposed in order to remove the genes irrelevant to the classification task, and then a support vector machine was applied to distinguish different cancer types. The feature subset selection process is performed by pair-wise redundancy analysis and the sequential floating forward search method after irrelevant genes have been removed. We analyzed the gene expression profiles of human acute leukemia as a test case, and the results showed the feasibility and effectiveness of the method proposed.

关键词:

Classification (of information) Computer aided diagnosis Feature extraction Genes Redundancy Tumors Vectors

作者机构:

  • [ 1 ] [Li, Ying-Xin]School of Electronic Information and Control Engineering, Beijing University of Technology, Beijing 100022, China
  • [ 2 ] [Ruan, Xiao-Gang]School of Electronic Information and Control Engineering, Beijing University of Technology, Beijing 100022, China

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来源 :

Acta Electronica Sinica

ISSN: 0372-2112

年份: 2005

期: 4

卷: 33

页码: 651-655

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